WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00037535 Gene Name  Cbr-wdr-48
Sequence Name  ? CBG18038 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: G-protein beta WD-40 repeat; WD40/YVTN repeat-like-containing domain superfamily; Domain of unknown function (DUF3337); WD40 repeat; WDR48/Bun107; WD domain, G-beta repeat; and WD40-repeat-containing domain superfamily. Is an ortholog of C. elegans wdr-48. In C. elegans, wdr-48 is involved in positive regulation of locomotion involved in locomotory behavior; positive regulation of macromolecule metabolic process; and positive regulation of protein localization to cell surface. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG18038a.1 CBG18038a.1   [unknown]
Transcript:CBG18038b.1 CBG18038b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG18038b CBG18038b   [unknown]
CDS:CBG18038a CBG18038a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG18038, AGTTGGAACCAGAAACGGATCTACGAACTGTCAAACACTTTTATTGGAAACAAAGCGGAG, WBGene00037535   Expr1052840 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term