WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00127675 Gene Name  CJA08471
Sequence Name  ? CJA08471 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: PRP38 family and Pre-mRNA-splicing factor 38. Is an ortholog of C. elegans Y108G3AL.2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA08471a.1 CJA08471a.1   [unknown]
Transcript:CJA08471b.1 CJA08471b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08471b CJA08471b   [unknown]
CDS:CJA08471a CJA08471a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA08471, GTACGGGACACTATTCCCACGTATTCCAGTACCAATTCAGAAAGAGATTGACGAGAAGTT, WBGene00127675   Expr1086056 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term