WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Strain :

WormBase ID  WBStrain00040228 CGC Received  2006-05-31
Genotype  nDf51 V; mir-84(n4037) X; ctIs39. Laboratory  CGC
Made By  WBPerson3211 Name  VT1142
Remark  ctIs39 [hbl-1::GFP + rol-6(su1006)]. Rollers and GFP+. Retarded heterochronic phenotype, reiteration of L2-stage program resulting in extra seam cells by the L3 stage and incomplete alae formation. >75% of animals explode at the vulva at the L4 molt. ctIs39 [hbl-1::GFP]: integrated reporter codes for 133 amino acids of HBL-1 followed by GFP, and contains 1.4 kb of hbl-1 3' UTR plus an NLS. hbl-1::GFP is elevated in the hypodermal syncytium at the L3 stage. nDf51 deletion deletes 5930 bp of cosmid F56A12 from 3520 to 9451, starting 1762 bp upstream of mir-241, covering mir-241 and lin-58. lin-58 is at 5908-5885 and mir-241 is at 7681-7661. nDf51: 5' of deletion: TGAAAGAAGCAGTTGAAAGCTTGCAGCCGACGAAAACTAGTGTAGCG. 3' of deletion: CTCACAATATTTTCATTTGAATATCGCGTTGAATTTGTAAGTGT. n4037 deletion is between 2891 and 3682 of clone B0395. mir-84 is at 3351-3330 in B0395. Species  Caenorhabditis elegans

2 Alleles

Public Name
n4037
nDf51

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003312 mir-84 B0395.4 Caenorhabditis elegans
WBGene00003335 mir-241 F56A12.4 Caenorhabditis elegans