WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00129079 Gene Name  Cjp-cng-3.2
Sequence Name  ? CJA09875 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Cyclic nucleotide-binding domain; RmlC-like jelly roll fold; and Cyclic nucleotide-binding-like. Is an ortholog of C. elegans cng-3. In C. elegans, cng-3 is involved in positive regulation of growth rate and response to heat. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA09875a.1 CJA09875a.1   [unknown]
Transcript:CJA09875b.1 CJA09875b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA09875a CJA09875a   [unknown]
CDS:CJA09875b CJA09875b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-cng-3, TTGGAGCCTCATTATTTCTGCCCTGGAGACGTTGTTATTGAAAAGGGACAACTTTGTAGT, WBGene00129079   Expr1078392 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term