WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00065703 Gene Name  Cre-eel-1
Sequence Name  ? CRE29934 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Domain of Unknown Function (DUF908); E3 ubiquitin ligase, domain of unknown function DUF908; E3 ubiquitin ligase, domain of unknown function DUF913; Ubiquitin-associated domain; UBA/TS-N domain; HUWE1/Rev1, ubiquitin binding region; Domain of Unknown Function (DUF913); Ubiquitin binding region; and UBA-like superfamily. Is an ortholog of C. elegans eel-1. In C. elegans, eel-1 is involved in several processes, including asymmetric protein localization involved in cell fate determination; hemidesmosome assembly; and signal transduction in response to DNA damage. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE29934.1 CRE29934.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE29934 CRE29934   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-eel-1, TGCTATCCTGACTCAATTCCCAAAACTTTTGGATTTCGATGTGAAGAGAAAATACTTCCG, WBGene00065703   Expr1115207 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term