WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00181220 Gene Name  CJA25648
Sequence Name  ? CJA25648 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1280) and Protein of unknown function DUF1280. Is an ortholog of C. elegans T07F8.1 and ZK686.6. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA25648a.1 CJA25648a.1   [unknown]
Transcript:CJA25648c.1 CJA25648c.1   [unknown]
Transcript:CJA25648b.1 CJA25648b.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA25648c CJA25648c   [unknown]
CDS:CJA25648a CJA25648a   [unknown]
CDS:CJA25648b CJA25648b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA26364, GTCTTCAAGGTGTCACGCAGTCTTACGGAATCAATTTCTTTCTTGCAGAAGCGAATCGTA, WBGene00181936   Expr1091805 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA25648, GACTGCTTCGAATGCGACCTTCACGACCCACAGTCTGAAGAAGAAAGAGTGAAAACATGC, WBGene00181220   Expr1074640 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA18331, ATTTGGACTATGTGGAATACGACAATGAAGACGGTGTCAGAGTTCGGAAAATGATTCGAA, WBGene00137534   Expr1078961 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term