WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00030710 Gene Name  Cbr-dpff-1
Sequence Name  ? CBG09043 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: DPF1-3, N-terminal domain; PHD-finger; Zinc finger, PHD-type; Zinc finger, PHD-finger; DPF1-3, N-terminal; Zinc finger, RING/FYVE/PHD-type; Zinc finger protein DPF3; and Zinc finger, FYVE/PHD-type. Is an ortholog of C. elegans dpff-1. In C. elegans, dpff-1 is involved in apoptotic process; meiotic cell cycle; and response to heat. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG09043b.1 CBG09043b.1   [unknown]
Transcript:CBG09043a.1 CBG09043a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG09043b CBG09043b   [unknown]
CDS:CBG09043a CBG09043a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG09043, ACTCATGCCGTTTGTGTCAAATCGAGTTTGGCGATAAAGCGAGTGCTCCAGCGAAGAAAT, WBGene00030710   Expr1054947 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term