WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00140426 Gene Name  Cbn-shn-1
Sequence Name  ? CBN01701 Organism  Caenorhabditis brenneri
Automated Description  Is predicted to encode a protein with the following domains: Sterile alpha motif domain; PDZ domain; Ankyrin repeat; Sterile alpha motif/pointed domain superfamily; Domain of unknown function DUF3447; SAM domain (Sterile alpha motif); Ankyrin repeat-containing domain superfamily; PDZ superfamily; PDZ domain 6; and Ankyrin repeats (3 copies). Is an ortholog of C. elegans shn-1. In C. elegans, shn-1 is involved in defecation and rhythmic behavior. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis brenneri 135651

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBN01701.1 CBN01701.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBN01701 CBN01701   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term