WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00220348 Gene Name  Bm87
Sequence Name  ? Bm87 Organism  Brugia malayi
Automated Description  Is affected by 20-hydroxyecdysone based on RNA-seq studies. Is an ortholog of O. volvulus OVOC2507 and OVOC2511. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm87.1 Bm87.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm87 Bm87   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in parasites exposed to 20-hydroxyecdysone. edgeR was used to analyze the data using the counts generated for the four samples with Cuffdiff. WBPaper00049261:20-hydroxyecdysone_upregulated_RNAseq

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term