WormMine: Gene WBGene00029627

• WormBase Gene ID: WBGene00029627
• Gene Name: Cbr-rbg-1
• Sequence Name: CBG07650
• Organism: Caenorhabditis briggsae
• Automated Description: Is predicted to encode a protein with the following domains: Rab3 GTPase-activating protein catalytic subunit and Rab3GAP catalytic subunit, conserved domain. Is an ortholog of C. elegans rbg-1. In C. elegans, rbg-1 is involved in amyloid fibril formation; autophagy; and positive regulation of autophagosome assembly.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Caenorhabditis briggsae
• Taxon Id: 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:CBG07650.1	CBG07650.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:CBG07650	CBG07650		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
Heat shock: 34C 30min.	Transcripts that showed significantly increased expression in L2 larva stage C. briggsae animals after incubated in a 34C water bath for 30min.	DESeq2 v 1.18.1, fold change > 2, FDR < 0.01.	WBPaper00058955:heatshock_upregulated_CBG

1 Expression Patterns

• Primary Identifier: Expr1060077
• Remark: Cbr-rbg-1, ATTGATCAAAGGCCATCGGAAGGAATATATTTTCATCTGGGACTTTAAACGTCCGTCGAC, WBGene00029627
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term