WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00272031 Gene Name  Ppa-smu-1
Sequence Name  ? PPA33662 Organism  Pristionchus pacificus
Automated Description  Is predicted to encode a protein with the following domains: WD40-repeat-containing domain superfamily; GRASP55/65 PDZ-like domain; WD40/YVTN repeat-like-containing domain superfamily; GRASP-type PDZ domain; WD domain, G-beta repeat; WD40 repeat; LisH-like dimerisation domain; and PDZ superfamily. Is an ortholog of C. elegans smu-1. In C. elegans, smu-1 is involved in several processes, including mechanosensory behavior; nematode larval development; and regulation of alternative mRNA splicing, via spliceosome. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA33662.1 PPA33662.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA33662 PPA33662   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term