WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00058536 Gene Name  Cre-slt-1
Sequence Name  ? CRE15302 Organism  Caenorhabditis remanei
Automated Description  Is predicted to encode a protein with the following domains: Leucine rich repeat N-terminal domain; Leucine rich repeat; Leucine-rich repeat, typical subtype; Leucine Rich Repeat; Leucine rich repeat C-terminal domain; Cysteine-rich flanking region, C-terminal; Leucine-rich repeat domain superfamily; Leucine-rich repeat; and Leucine-rich repeat N-terminal domain. Is an ortholog of C. elegans slt-1. In C. elegans, slt-1 is involved in generation of neurons and regulation of neuron projection development. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis remanei 31234

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CRE15302.1 CRE15302.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CRE15302 CRE15302   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cre-slt-1, CCAACAAGAATTTGACGAGTTTTCCGAGCAGAATTCCATTTGACACTACTGAACTCTATC, WBGene00058536   Expr1116907 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term