WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124970 Gene Name  Cjp-pod-1
Sequence Name  ? CJA05766 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Domain of unknown function DUF1899; Type of WD40 repeat; Quinoprotein alcohol dehydrogenase-like superfamily; Coronin; WD40/YVTN repeat-like-containing domain superfamily; WD40 repeat; Coronin 7; and Domain of unknown function (DUF1899). Is an ortholog of C. elegans pod-1. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA05766.1 CJA05766.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA05766 CJA05766   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA26022, AATCTTGTTCAGTTGACGTGAAACGAGATGGAATTAGTGATGAGGAGGAAGAGGATTATG, WBGene00181594   Expr1078965 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-pod-1, ACTCGCACCGTTCATGTCGCCCGTCGGAGGACAGGGTATTGCGTTCCATCATAAGATTAA, WBGene00124970   Expr1082189 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term