WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00124496 Gene Name  Cjp-aspm-1
Sequence Name  ? CJA05292 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Calponin homology (CH) domain; IQ calmodulin-binding motif; Calponin homology domain; IQ motif, EF-hand binding site; and CH domain superfamily. Is an ortholog of C. elegans aspm-1. In C. elegans, aspm-1 is involved in establishment of meiotic spindle orientation; meiotic spindle organization; and regulation of protein localization. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA05292.1 CJA05292.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA05292 CJA05292   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-aspm-1, AAAACTGAGAAAGTCGACGCTTCATGGATTGACCAATGCTAATCTTCACTTTGTTCACCT, WBGene00124496   Expr1073219 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term