WormMine: Gene WBGene00281337

• WormBase Gene ID: WBGene00281337
• Gene Name: PPA42968
• Sequence Name: PPA42968
• Organism: Pristionchus pacificus
• Automated Description: Is predicted to encode a protein with the following domains: Leucine-rich repeat domain superfamily; Leucine-rich repeat; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans Y42G9A.3.
• Biotype: SO:0001217
• Genetic Position: :±

1 Organism

• Name: Pristionchus pacificus
• Taxon Id: 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:PPA42968.1	PPA42968.1		[unknown]

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:PPA42968	PPA42968		[unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

• WormBaseAcedbConverter

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Differentially expressed genes between eud-1(tu1069) and PS312.	Fold change > 2 and p-value < 0.05.	WBPaper00061743:ppa-eud-1(tu1069)_regulated
	Pristionchus pacificus genes down regulated in the dauer versus dauer-exit worms.	The weight parameters were optimized based on MA-plots such that spike-in controls show their expected fold change values. lmFit function was used to fit a linear model to probe intensities across arrays, and differential expression was calculated by empirical Bayes method using the eBayes function. Control of FDR was employed as correction for multiple testing.	WBPaper00041207:PP_dauer_down

0 Expression Patterns

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term