WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The weight parameters were optimized based on MA-plots such that spike-in controls show their expected fold change values. lmFit function was used to fit a linear model to probe intensities across arrays, and differential expression was calculated by empirical Bayes method using the eBayes function. Control of FDR was employed as correction for multiple testing. Description  Pristionchus pacificus genes down regulated in the dauer versus dauer-exit worms.
Primary Identifier  WBPaper00041207:PP_dauer_down

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00089576 PPA00022 PPA00022 Pristionchus pacificus
WBGene00089654 PPA00100 PPA00100 Pristionchus pacificus
WBGene00089682 PPA00128 PPA00128 Pristionchus pacificus
WBGene00089734 Ppa-cdk-8 PPA00180 Pristionchus pacificus
WBGene00089770 Ppa-gfm-1 PPA00216 Pristionchus pacificus
WBGene00089797 Ppa-inf-1 PPA00243 Pristionchus pacificus
WBGene00089807 PPA00253 PPA00253 Pristionchus pacificus
WBGene00089811 Ppa-tmc-1 PPA00257 Pristionchus pacificus
WBGene00089869 Ppa-ctsa-4.2 PPA00315 Pristionchus pacificus
WBGene00089890 Ppa-abcf-1 PPA00336 Pristionchus pacificus
WBGene00089891 PPA00337 PPA00337 Pristionchus pacificus
WBGene00089902 Ppa-ruvb-1 PPA00348 Pristionchus pacificus
WBGene00089911 PPA00357 PPA00357 Pristionchus pacificus
WBGene00089948 Ppa-mppa-1 PPA00394 Pristionchus pacificus
WBGene00089964 PPA00410 PPA00410 Pristionchus pacificus
WBGene00089981 PPA00427 PPA00427 Pristionchus pacificus
WBGene00089982 Ppa-chmp-7 PPA00428 Pristionchus pacificus
WBGene00090070 PPA00516 PPA00516 Pristionchus pacificus
WBGene00090078 PPA00524 PPA00524 Pristionchus pacificus
WBGene00090139 PPA00585 PPA00585 Pristionchus pacificus
WBGene00090213 Ppa-dars-1 PPA00659 Pristionchus pacificus
WBGene00090264 PPA00710 PPA00710 Pristionchus pacificus
WBGene00090305 Ppa-spl-1 PPA00751 Pristionchus pacificus
WBGene00090405 Ppa-pbo-1 PPA00851 Pristionchus pacificus
WBGene00090436 Ppa-mlh-1 PPA00882 Pristionchus pacificus
WBGene00090448 PPA00894 PPA00894 Pristionchus pacificus
WBGene00090534 PPA00980 PPA00980 Pristionchus pacificus
WBGene00090604 PPA01050 PPA01050 Pristionchus pacificus
WBGene00090658 Ppa-nepr-1 PPA01104 Pristionchus pacificus
WBGene00090728 PPA01174 PPA01174 Pristionchus pacificus

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  A third stage larva specialized for dispersal and long term survival. dauer larva Ce WBls:0000032

0 Processes

0 Regulated By Gene

0 Regulated By Molecule