WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00135337 Gene Name  Cjp-aex-4
Sequence Name  ? CJA16133 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domain: Target SNARE coiled-coil homology domain. Is an ortholog of C. elegans aex-4. In C. elegans, aex-4 is involved in positive regulation of defecation and positive regulation of protein secretion. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA16133a.1 CJA16133a.1   [unknown]
Transcript:CJA16133b.1 CJA16133b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA16133b CJA16133b   [unknown]
CDS:CJA16133a CJA16133a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-tag-81, CCTGTGACACGATTGAAGATGAGTTGGAGAAGAACCTAATACACATTGATCAAGGAATCG, WBGene00135337   Expr1073992 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term