WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:0106174 phagolysosome vesicle lumen GO

Namespace  cellular_component Obsolete  false
Description  The volume enclosed by the membrane of a phagolysosome.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

27 Parents

Identifier Name Description
GO:0005737 cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0005575 cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).
GO:0005622 intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm.
GO:0110165 cellular anatomical structure A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.
GO:0043227 membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0043231 intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0031974 membrane-enclosed lumen The enclosed volume within a sealed membrane or between two sealed membranes. Encompasses the volume enclosed by the membranes of a particular organelle, e.g. endoplasmic reticulum lumen, or the space between the two lipid bilayers of a double membrane surrounding an organelle, e.g. nuclear envelope lumen.
GO:0070013 intracellular organelle lumen An organelle lumen that is part of an intracellular organelle.
GO:0043233 organelle lumen The internal volume enclosed by the membranes of a particular organelle; includes the volume enclosed by a single organelle membrane, e.g. endoplasmic reticulum lumen, or the volume enclosed by the innermost of the two lipid bilayers of an organelle envelope, e.g. nuclear lumen.
GO:0005773 vacuole A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol.
GO:0000323 lytic vacuole A vacuole that is maintained at an acidic pH and which contains degradative enzymes, including a wide variety of acid hydrolases.
GO:0005775 vacuolar lumen The volume enclosed within the vacuolar membrane.
GO:0031410 cytoplasmic vesicle A vesicle found in the cytoplasm of a cell.
GO:0097708 intracellular vesicle Any vesicle that is part of the intracellular region.
GO:0031982 vesicle Any small, fluid-filled, spherical organelle enclosed by membrane.
GO:0005764 lysosome A small lytic vacuole that has cell cycle-independent morphology found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.
GO:0005767 secondary lysosome Vacuole formed by the fusion of a lysosome with an organelle (autosome) or with a primary phagosome.
GO:0032010 phagolysosome A membrane-bounded intracellular vesicle formed by maturation of an early phagosome following the ingestion of particulate material by phagocytosis; during maturation, phagosomes acquire markers of late endosomes and lysosomes.
GO:0030139 endocytic vesicle A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.
GO:0045335 phagocytic vesicle A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
GO:0060205 cytoplasmic vesicle lumen The volume enclosed by a cytoplasmic vesicle.
GO:0031983 vesicle lumen The volume enclosed by the membrane or protein that forms a vesicle.
GO:0097013 phagocytic vesicle lumen The volume enclosed by the membrane of a phagocytic vesicle.
GO:0071682 endocytic vesicle lumen The volume enclosed by the membrane of an endocytic vesicle.
GO:0106174 phagolysosome vesicle lumen The volume enclosed by the membrane of a phagolysosome.

28 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
part of GO:0032010 GO:0106174
is_a GO:0097013 GO:0106174
is_a GO:0005775 GO:0106174
is_a GO:0060205 GO:0106174
part of GO:0005773 GO:0106174
part of GO:0005575 GO:0106174
part of GO:0031982 GO:0106174
part of GO:0005737 GO:0106174
part of GO:0000323 GO:0106174
part of GO:0043229 GO:0106174
is_a GO:0043233 GO:0106174
is_a GO:0005575 GO:0106174
part of GO:0097708 GO:0106174
is_a GO:0031983 GO:0106174
part of GO:0045335 GO:0106174
is_a GO:0071682 GO:0106174
part of GO:0043231 GO:0106174
is_a GO:0070013 GO:0106174
part of GO:0110165 GO:0106174
part of GO:0005622 GO:0106174
part of GO:0005764 GO:0106174
part of GO:0031410 GO:0106174
part of GO:0005767 GO:0106174
is_a GO:0031974 GO:0106174
is_a GO:0110165 GO:0106174
part of GO:0043226 GO:0106174
part of GO:0043227 GO:0106174
part of GO:0030139 GO:0106174

0 Synonyms