WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00035832 Gene Name  CBG15679
Sequence Name  ? CBG15679 Organism  Caenorhabditis briggsae
Automated Description  Is predicted to encode a protein with the following domains: Tc5 transposase DNA-binding domain; Homeobox-like domain superfamily; and HTH CenpB-type DNA-binding domain. Is an ortholog of C. elegans Y53G8AM.8. Biotype  SO:0001217
Genetic Position 
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG15679a.1 CBG15679a.1   [unknown]
Transcript:CBG15679b.1 CBG15679b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG15679b CBG15679b   [unknown]
CDS:CBG15679a CBG15679a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CBG15679, ATAAGGAGATTGAATCGTTACTTACCAAGTTGAGGCAGTACATTCTGGATCATGATCAGG, WBGene00035832   Expr1052108 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term