WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00182316 Gene Name  CJA26744
Sequence Name  ? CJA26744 Organism  Caenorhabditis japonica
Automated Description  Is predicted to encode a protein with the following domains: Zinc finger, MYND-type and MYND finger. Is an ortholog of C. elegans egl-9. In C. elegans, egl-9 is involved in regulation of protein localization and response to hypoxia. Biotype  SO:0001217
Genetic Position 
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA26744.1 CJA26744.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA26744 CJA26744   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

1 Data Sets

Name URL
WormBaseAcedbConverter  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-egl-9, TTTCCGACGAGTAACGCCTCGCAAACAGACATCAGTAGATTAGGTATGATTTATGCAACC, WBGene00182316   Expr1072542 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

0 GO Annotation

0 Homologues

0 Locations

0 Ontology Annotations

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term