WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

GO Term : GO:1990425 ryanodine receptor complex GO

Namespace  cellular_component Obsolete  false
Description  A voltage-gated calcium-release channel complex of the sarcoplasmic or endoplasmic reticulum. It plays an important role in the excitation-contraction (E-C) coupling of muscle cells. RyR comprises a family of ryanodine receptors, widely expressed throughout the animal kingdom.

0 Cross References

0 Data Sets

1 Ontology

Name
GO

0 Ontology Annotations

33 Parents

Identifier Name Description
GO:0032991 protein-containing complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which at least one component is a protein and the constituent parts function together.
GO:0005737 cytoplasm The contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0005575 cellular_component A location, relative to cellular compartments and structures, occupied by a macromolecular machine. There are three types of cellular components described in the gene ontology: (1) the cellular anatomical entity where a gene product carries out a molecular function (e.g., plasma membrane, cytoskeleton) or membrane-enclosed compartments (e.g., mitochondrion); (2) virion components, where viral proteins act, and (3) the stable macromolecular complexes of which gene product are parts (e.g., the clathrin complex).
GO:0005622 intracellular anatomical structure A component of a cell contained within (but not including) the plasma membrane. In eukaryotes it includes the nucleus and cytoplasm.
GO:0110165 cellular anatomical structure A part of a cellular organism consisting of a material entity with granularity above the level of a protein complex but below that of an anatomical system. Note that cellular organisms exclude viruses.
GO:0043227 membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0043231 intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0071944 cell periphery The broad region around and including the plasma membrane of a cell, encompassing the cell cortex (inside the cell), the plasma membrane, and any external encapsulating structures.
GO:0098796 membrane protein complex Any protein complex that is part of a membrane.
GO:0012505 endomembrane system A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.
GO:0031984 organelle subcompartment A compartment that consists of a lumen and an enclosing membrane, and is part of an organelle.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it.
GO:0098588 bounding membrane of organelle The lipid bilayer that forms the outer-most layer of an organelle.
GO:0031090 organelle membrane A membrane that is one of the two lipid bilayers of an organelle envelope or the outermost membrane of single membrane bound organelle.
GO:1990351 transporter complex A protein complex facilitating transport of molecules (proteins, small molecules, nucleic acids) into, out of or within a cell, or between cells.
GO:1902495 transmembrane transporter complex A transmembrane protein complex which enables the transfer of a substance from one side of a membrane to the other.
GO:0005886 plasma membrane The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
GO:0098797 plasma membrane protein complex Any protein complex that is part of the plasma membrane.
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.
GO:0140534 endoplasmic reticulum protein-containing complex A protein complex that is part of an endoplasmic reticulum.
GO:0098827 endoplasmic reticulum subcompartment A distinct region of the endoplasmic reticulum.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network The continuous network of membranes encompassing the nuclear outer membrane and the endoplasmic reticulum membrane.
GO:0034703 cation channel complex An ion channel complex through which cations pass.
GO:0034702 monoatomic ion channel complex A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective monoatomic ion transport down its electrochemical gradient.
GO:0005891 voltage-gated calcium channel complex A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.
GO:0034704 calcium channel complex An ion channel complex through which calcium ions pass.
GO:0033017 sarcoplasmic reticulum membrane The lipid bilayer surrounding the sarcoplasmic reticulum.

33 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0005891 GO:1990425
is_a GO:0140534 GO:1990425
part of GO:0033017 GO:1990425
is_a GO:0098797 GO:1990425
is_a GO:0098796 GO:1990425
part of GO:0031090 GO:1990425
part of GO:0071944 GO:1990425
part of GO:0098827 GO:1990425
part of GO:0098588 GO:1990425
part of GO:0005737 GO:1990425
is_a GO:0032991 GO:1990425
part of GO:0005575 GO:1990425
part of GO:0043231 GO:1990425
part of GO:0016528 GO:1990425
part of GO:0016529 GO:1990425
part of GO:0043229 GO:1990425
is_a GO:0005575 GO:1990425
part of GO:0031984 GO:1990425
part of GO:0016020 GO:1990425
is_a GO:1990351 GO:1990425
is_a GO:1902495 GO:1990425
part of GO:0005789 GO:1990425
part of GO:0005886 GO:1990425
part of GO:0005622 GO:1990425
is_a GO:0034702 GO:1990425
part of GO:0110165 GO:1990425
part of GO:0043226 GO:1990425
is_a GO:0034703 GO:1990425
part of GO:0043227 GO:1990425
is_a GO:0034704 GO:1990425

1 Synonyms

Name Type
RyR synonym