WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  tbx-8 is expressed in three different cell types in the embryo, gut, muscle and hypodermis. The earliest embryonic expression was detected in the E lineage gut cell precursors Ea and Ep at the beginning of gastrulation (100 minutes after first cleavage). Expression was seen in the direct descendents of Ea and Ep but was not obvious later in E lineage nuclei. tbx-8 was subsequently expressed in muscle and hypodermal cells. The expression of tbx-8 was stronger in dorsal hypodermal nuclei. This is particularly evident in embryos that have been co-stained with LIN-26 and GFP antibodies. Expression could also be seen in dorsal hypodermal nuclei undergoing contralateral migration following cellular intercalation, and in lateral hypodermal cells during dorsal intercalation, although expression in lateral hypodermal cells at this stage was weaker. Expression in lateral hypodermal (seam) cells could also be seen later in embryogenesis until the 1.5-fold stage. No expression was observed in ventral hypodermal cells. The earliest detectable muscle cell expression was seen around the 400-cell stage, when muscle cells were present as two rows on the left and right sides of the embryo. Primary Identifier  Expr2945
Remark  No detailed description on expression pattern in other life stages. Subcellular Localization  In all cases expression was found to be nuclear.

8 Anatomy Terms

Definition Name Synonym Primary Identifier
Epidermal layer. hypodermis epidermis WBbt:0005733
Contractile cell that makes up muscle tissue. muscle cell   WBbt:0003675
embryonic cell Ep   WBbt:0006612
embryonic cell Ea   WBbt:0006733
embryonic cell Epl   WBbt:0006000
embryonic cell Eal   WBbt:0006441
embryonic cell Ear   WBbt:0006370
embryonic cell Epr   WBbt:0006547

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006545 tbx-8 T07C4.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003