WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  In transgenic worms carrying the vha-5::GFP construct, a fluorescent signal was strongly detected in an H-shaped excretory cell and the pharynx at the L2 and adult stages. In addition to these cells, the vha-5::GFP fusion was found in hypodermal cells around the vulvae of adult worms. Primary Identifier  Expr2403
Remark  Antibody staining result showed that VHA-5 expression was not observed in the pharynx, where the vha-5::GFP reporter was active, indicating that the expression may be due to an increased copy number of the reporter plasmid. See Expr2406. Reporter gene fusion type not specified.
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Epidermal layer. hypodermis epidermis WBbt:0005733
the feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine. pharynx esophagus WBbt:0003681
H-shaped cell associated with the excretory system, largest cell in C. elegans. excretory cell excretory canal cell WBbt:0005812

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006914 vha-5 F35H10.4 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027