WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  In wild-type animals, the mab-21::gfp fluorescent signal was first observed in embryos at the beginning of gastrulation. The expressing cells were dorsal hyp 7 cells before their fusion. From this stage on, the signal could be detected in other larval and adult animals in tissues including hypodermal cells, a group of neuronal cells near the pharyngeal bulbs, neurons along the ventral nerve cord, some body wall muscles and the ray cells. Neuronal cells around the anal ganglia region identified as HOA, HOB in the males as well as PLM, PQR, and PVC. In addition to two unidentified anterior neurons, AVM and VA3 were also confirmed to express mab-21::gfp. The mab-21::gfp fusion transgene was expressed in neuron A of all rays, neuron B of rays 3 and 6 and more importantly, the structural cell of only ray 6. Primary Identifier  Expr1628

35 Anatomy Terms

Definition Name Synonym Primary Identifier
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
Neuron class of one sensory neuron, basal body, not part of a sensillum, projects into preanal gangion. PQR lineage name: QL.ap WBbt:0004096
entire syncytium of hyp7 hyp7 syncytium hyp7 WBbt:0005734
Ventral cord interneuron, cell body in lumbar ganglion, synapses onto VB and DB motor neurons, formerly called delta. PVCR lineage name: ABprpppaapaa WBbt:0004092
Ventral cord interneuron, cell body in lumbar ganglion, synapses onto VB and DB motor neurons, formerly called delta. PVCL lineage name: ABplpppaapaa WBbt:0004094
Neuron class of one sensory neuron, anterior ventral microtubule cell, touch receptor. AVM lineage name: QR.paa WBbt:0003832
Posterior lateral microtubule cell, touch receptor PLML lineage name: ABplapappppaa WBbt:0004104
Posterior lateral microtubule cell, touch receptor PLMR lineage name: ABprapappppaa WBbt:0004103
Post-embryonic cell of pedigree V6L.pppapaaa, male sensory rays, neuron, striated rootlet. R4AL lineage name: V6L.pppapaaa WBbt:0004030
Post-embryonic cell of pedigree V6R.pppapaaa, male sensory rays, neuron, striated rootlet. R4AR lineage name: V6R.pppapaaa WBbt:0004029
Post-embryonic cell of pedigree V6L.papapaaa, male sensory rays, neuron, striated rootlet. R2AL lineage name: R2L.aaa WBbt:0004042
Post-embryonic cell of pedigree V6R.papapaaa, male sensory rays, neuron, striated rootlet. R2AR lineage name: R2R.aaa WBbt:0004041
Post-embryonic cell of pedigree V6L.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BL lineage name: V6L.papppapa WBbt:0004034
Post-embryonic cell of pedigree V6R.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BR lineage name: V6R.papppapa WBbt:0004033
Neuron class of one male-specific sensory neuron associated with hook sensillum, receptor anterior to cloaca in male. HOB lineage name: P10.ppap WBbt:0004761
Post-embryonic cell of pedigree V6R.pppppapp, male sensory rays, structural cell. R6stR lineage name: V6R.pppppapp WBbt:0004008
Post-embryonic cell of pedigree V6L.pppppapp, male sensory rays, structural cell. R6stL lineage name: V6L.pppppapp WBbt:0004010
Post-embryonic cell of pedigree V6R.pppppapa, male sensory rays, neuron, not darkly staining nor open to outside. R6BR lineage name: V6R.pppppapa WBbt:0004012
Post-embryonic cell of pedigree V6L.pppppaaa, male sensory rays, neuron, striated rootlet. R6AL lineage name: V6L.pppppaaa WBbt:0004018
Post-embryonic cell of pedigree V6R.pppppaaa, male sensory rays, neuron, striated rootlet. R6AR lineage name: V6R.pppppaaa WBbt:0004016
Post-embryonic cell of pedigree V6L.pppppapa, male sensory rays, neuron, not darkly staining nor open to outside. R6BL lineage name: V6L.pppppapa WBbt:0004014
Post-embryonic cell of pedigree V5L.pppppaaa, male sensory rays, neuron, striated rootlet. R1AL lineage name: R1L.aaa WBbt:0004052
Post-embryonic cell of pedigree V5R.pppppaaa, male sensory rays, neuron, striated rootlet. R1AR lineage name: R1R.aaa WBbt:0004050
Male sensory rays, neuron, striated rootlet R9AR lineage name: TR.appapaaa WBbt:0003970
Male sensory rays, neuron, striated rootlet R7AR lineage name: TR.apappaaa WBbt:0004002
Post-embryonic cell of pedigree V6R.ppppaaaa, male sensory rays, neuron, striated rootlet. R5AR lineage name: V6R.ppppaaaa WBbt:0004023
Male sensory rays, neuron, striated rootlet R9AL lineage name: TL.appapaaa WBbt:0003971
Post-embryonic cell of pedigree TL.apappaaa, male sensory rays, neuron, striated rootlet. R7AL lineage name: TL.apappaaa WBbt:0004006
Post-embryonic cell of pedigree V6R.papppaaa, male sensory rays, neuron, striated rootlet. R3AR lineage name: V6R.papppaaa WBbt:0004035
Post-embryonic cell of pedigree TL.appaaaaa, male sensory rays, neuron, striated rootlet. R8AL lineage name: TL.appaaaaa WBbt:0003994

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003112 mab-21 F35G12.6 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023
  The C. elegans life stage spanning 350-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The stage that embryo starts elongation until elongation is over. elongating embryo Ce WBls:0000015
  The C. elegans life stage spanning 290-350min after first cleavage at 20 Centigrade. Proliferate from 421 cells to 560 cells. The stage when embryo just finished gastrulation and is enclosing. enclosing embryo Ce WBls:0000013
  The C. elegans life stage spanning 100-290min after first cleavage at 20 Centigrade. Proliferate from 28 cells to 421 cells. Referring to the whole period of gastrulation. gastrulating embryo Ce WBls:0000010