WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  The anti-LIN-56 antibodies were used for whole-mount staining of worms. Starting at the late one-cell or early two-cell stage, LIN-56 staining was observed in the nuclei of most if not all somatic cells throughout embryonic and larval development as well as adulthood. LIN-56 is present in the P(3-8).p vulval equivalence group and their descendants throughout vulval development. Germline staining was observed in both wild-type and lin-56(n2728) animals and thus was not specific. Primary Identifier  Expr9238
Subcellular Localization  To confirm that LIN-56 is localized to nuclei, subcellular fractionation of embryo lysates was performed. Lamin was used as a marker for nuclear fractions and SQV-4 as a marker for cytosolic material. The majority of the LIN-56 protein co- fractionated with nuclear lamin; LIN-56 protein was barely detectable in the SQV-4-containing cytosolic fraction. LIN-56 is thus stably associated with nuclei.

1 Anatomy Terms

Definition Name Synonym Primary Identifier
Nucleated cell which has a diploid set of chromosomes. somatic cell FMA:72300 WBbt:0008378

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003038 lin-56 ZK673.3 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003