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Proteins that showed significantly decreased expression in day 10 heat shocked adults comparing to heat shocked young adult animals. |
N.A. |
WBPaper00044746:aging_downregulated_HeatShock
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Proteins that showed significantly increased expression in day 10 heat shocked adults comparing to heat shocked young adult animals. |
N.A. |
WBPaper00044746:aging_upregulated_HeatShock
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Proteins that showed significantly increased expression in day 10 adults comparing to young adults. |
N.A. |
WBPaper00044746:aging_upregulated_Day10
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Proteins that were rapidly synthesized between day 11 and day 16 adults. |
The mass tolerance was set at 10ppm for precursor ions and 0.8Da for product ions. Strict Lys-C specificity was applied, and missed cleavages were not allowed. BuildSummary was used to generate a confident protein list with a peptide false discovery rate <= 0.01. Other criteria for significant peptide identifications included the following: peptides must be composed of at least six amino acid residues and have a minimum Mascot score of 20, which corresponds to Mascot absolute probability of 0.01. |
WBPaper00046446:rapid-synthesized_AgingAdult
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Proteins that showed significantly decreased expression in day 10 adults comparing to young adults. |
N.A. |
WBPaper00044746:aging_downregulated_Day10
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Genes with dynamic regulation pattern in signaling pathways during aging, based on re-analysis of microarray datasets. |
The approaches of Gene Set Enrichment Analysis (GSEA) were performed using Category package in version 2.6.0 of Bioconductor to identify the significantly enriched pathways and genes in both above two subsets. In this analysis, the gene sets with less than 10 genes were excluded. The t-statistic mean of the genes was computed in each KEGG (Kyoto Encyclopedia of Genes and Genomes) pathway. Using a permutation test with 1000 times, the cutoff of significance level p value was set as 0.01 for the most significant pathways related to aging. Accordingly, the significant pathways and genes were then identified under the comparison between different time points, including from L4 to D6 and from D6 to D15. |
WBPaper00045140:aging_dynamic_regulation
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