WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Life Stage :

Definition  Any developmental stage in a nematode, including embryo, larva and adult stage. Primary Identifier  WBls:0000101
Public Name  Nematode life stage

0 Anatomy Terms

1 Contained In

Remark Definition Other Name Public Name Primary Identifier
  A developemental life stage of a worm worm life stage WBls:0000075

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Protein that contains phosphorylation site according to nano-HPLC and mass spectrometry on enriched phosphopeptides. The database search results were parsed by MaxQuant to assemble protein groups, peptides, and phosphorylation sites at a false discovery rate of 1%. All phosphorylation events having a reported localization probability of at least 0.75 were considered as localized (assigned to a specific amino acid). WBPaper00041472:Phosphorylated_protein

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr15818 We found that the cell type that expressed the transgene most robustly at every developmental stage is the canal-associated neurons (CANs), whose cell body are near the midbody with processes that run along the excretory canal laterally along most of the body. All developmental stages also show Ppa-hsd-2p::rfp expression in a few intestinal cells as well as the excretory gland cell, though expression in the excretory canal was detectable only in the dauer stage.  

0 Followed By

0 Preceded By

8 Sub Stages

Remark Definition Other Name Public Name Primary Identifier
  The whole period of embryogenesis in a nematode, from the formation of an egg until hatching. nematode embryo WBls:0000102
  The stage that begins after hatching and ends when the nematode becomes adult. nematode larval stage WBls:0000105
  The nematode life-stage that begins when the organism is fully-developed and has reached maturity. nematode adult WBls:0000104
  The nematode life-cycle stage that occurs entirely outside of a host organism. free-living nematode stage WBls:0000001
  A developemental life stage in a nematode that occurs from egg hatching until death. postembryonic nematode WBls:0000103
  Any Strongyloides developmental stage, including free-living and parasitic stages. Strongyloides life stage WBls:0000076
  Any developmental stage of a nematode of the Onchocerca genus. Onchocerca life stage WBls:0000741
  The nematode life-cycle stage that occurs entirely or partially within a host or vector organism. parasitic nematode stage WBls:0000059