WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Both reporters are expressed at the time of vulval induction at equal levels in P5.p, P6.p, and P7.p. After the first round of cell divisions, the translational DEP-1::GFP reporter is down-regulated in the primary lineage, but expression persists in the secondary vulval cells until the L4 stage. DEP-1::GFP expression is lower in P6.p than in P5.p or P7.p descendants in 82% of L3 and in 95% of L4 larvae (n = 26 and n = 21, respectively). A similar reduction of the expression in the primary lineage is observed with the transcriptional reporter, although the down-regulation in the primary lineage only becomes apparent at the Pn.pxx stage. dep-1p::gfp expression is lower in P6.p than in P5.p or P7.p descendants in 80% of the L3 larvae (n = 78). In most cases (e.g., 17 out of 18 larvae at the Pn.px and Pn.pxx stages), DEP-1::GFP expression is low or absent in cells expressing high LET-23 EGFR levels and vice versa. Primary Identifier  Expr4213
Remark  No GO_term assigned. Subcellular Localization  Most of the DEP-1::GFP fusion protein is localized in intracellular punctae that partially colocalize with intracellular LET-23 EGFR.

15 Anatomy Terms

Definition Name Synonym Primary Identifier
descendent cell of post-embryonic blast cell P5, posterior, in hermaphrodite. P5.p hermaphrodite   WBbt:0008121
  P7.p hermaphrodite   WBbt:0008129
  P6.p hermaphrodite   WBbt:0008125
Posterior daughter cell of P5.pp, fuses into hermaphrodite vulD syncytium. P5.ppp lineage name: P5.ppp WBbt:0004477
Anterior daughter cell of P7.pa, fuses into hermaphrodite vulD syncytium. P7.paa lineage name: P7.paa WBbt:0004448
cell, posterior descendent of P7.p P7.pp   WBbt:0006984
cell, anterior descendent of P7.p P7.pa   WBbt:0006983
post-embryonic cell of pedigree P5.pp P5.pp   WBbt:0007255
post-embryonic cell of pedigree P5.pap P5.pap   WBbt:0007254
post-embryonic cell of pedigree P5.paa P5.paa   WBbt:0007253
post-embryonic cell of pedigree P5.pa P5.pa   WBbt:0007252
post-embryonic cell of pedigree P7.ppa P7.ppa   WBbt:0007265
post-embryonic cell of pedigree P7.pap P7.pap   WBbt:0007264
post-embryonic cell of pedigree P5.ppa P5.ppa   WBbt:0007256
post-embryonic cell of pedigree P7.ppp P7.ppp   WBbt:0007266

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009717 dep-1 F44G4.8 Caenorhabditis elegans

0 Life Stages