WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Anatomy Term :

Definition  Ring motor neuron/interneuron Name  RMHL
Primary Identifier  WBbt:0005011 Synonym  lineage name: G1.l

1 Children

Definition Name Synonym Primary Identifier
nucleus of pedigree G1.l G1.l nucleus   WBbt:0002735

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Single-cell RNA-Seq cell group 94_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:94_0

31 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr15649    
    Expr15558    
    Expr15571    
    Expr15572    
    Expr15573    
    Expr15579    
    Expr15586    
    Expr15651    
    Expr15652    
    Expr15589    
    Expr13158    
    Expr15591    
    Expr15598    
    Expr15604    
    Expr15608    
    Expr15611    
    Expr15351    
    Expr15364    
    Expr12716    
    Expr12717    
    Expr15624    
    Expr16145 We found that in the adult nervous system unc-42 is strongly and consistently expressed in 40 neurons located in the head of the worm that fall into 15 anatomically distinct neuron classes. At the first larval stage, expression is detected in the same set of neuron classes as observed in the adult, with the addition of very weak and inconsistent expression in AVJ and SIA that disappears by the adult stage. In the embryo, expression is first observed in a few neuroblasts before the bean stage. At the bean stage, when most neurons have terminally divided, unc-42 expression commences and reaches the full complement of unc-42(+) cells at the 1.5-fold stage. The cellular sites of expression in the embryonic nervous system appear to be the same as observed post-embryonically, a notion further supported by recent scRNA data (Packer et al., 2019). No expression is observed outside the nervous system.  
    Expr15658    
    Expr15336    
    Expr13957 Using a fosmid-based GFP translational fusion, we found that zag-1 was expressed in the six TRNs but not in the FLP and PVD neurons. In addition to TRNs, zag-1 was expressed in the AIB, AIM, AIN, AIZ, AVA, AVB, AVD, AVE, AVG, AVK, AVL, M4, M5, RIA, RIB, RIF, RIG, RIM, RIV, RMD, RME, RMF, RMH, SIA, and SMD neurons in the head, all the DD, VD, and VC neurons in the ventral cord, and the DVA, DVB, LUA, PDA, PVC, PVP, PVQ, PVR, and PVT neurons in the tail. zag-1 is also expressed in the serotonergic HSN neurons.  
    Expr15854 lgc-54 was expressed in two neuron pairs: AVE and RMH.  
    Expr15581    
    Expr3177 Expressed in intestine, RMF, RMH.  
    Expr12603 sem-2 expression was identified in several early blastomeres and in some neuronal and non-neuronal progenitors. Its expression colocalized with that of sox-2 in a few progenitors. As in vertebrates, sem-2 expression was observed in postmitotic neurons, but in contrast to the broad expression of SoxC genes in vertebrate postmitotic neurons, only a single class of postembryonic neurons expresses sem-2, the RMH class. sem-2 expression in these neurons is observed throughout larval and adult stages. We did not detect any sem-2 expression in the RME neurons themselves, but sem-2 is instead expressed in the progenitor of RMEL/R.  
    Expr11638 As predicted from expression driven by the individual promoters, only 3 pairs of ring motorneurons (RMHs, RMFs, RMDs) expressed both ser-1::yfp and mpz-1::cfp. Unfortunately, attempts to colocalize the full length proteins were unsuccessful using this approach as SER-1::YFP and SER-1::CFP aggregated significantly when expressed in vulval muscle.  

0 Life Stages

4 Parents

Definition Name Synonym Primary Identifier
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
ventral ganglion, anterior part. ventral ganglion (ant)   WBbt:0005266
Postembryonic blast cell, excretory socket in embryo G1 lineage name: ABprpaaaapa WBbt:0004780
Neuron class of two motoneurons which innervate muscles in the head via NMJs in the nerve ring. RMH   WBbt:0006843