WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Life Stage :

Definition  At 20 Centigrade: 7-8 days after L4-adult molt. 10-11 days after first cleavage. Primary Identifier  WBls:0000671
Public Name  7-days post-L4 adult hermaphrodite Ce

0 Anatomy Terms

2 Contained In

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057
  A C. elegans life stage that occurs during the adult life stage C. elegans life stage occurring during adulthood WBls:0000816

8 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in daf-16(mu86);fer-15(b26ts) comparing to in fer-15(b26ts) at 6-day or 7-day post L4 adult hermaphrodite stage. DESeq2 (v1.18.1), ajusted p-value < 0.05 WBPaper00056218:daf-16(mu86)_upregulated_Day7
  Transcripts that showed significantly increased expression in xpf-1(tm2842) comparing to in N2 animals. DESeq2 1.14.1, fold change > 2, FDR < 0.01. WBPaper00062497:xpf-1(tm2842)_upregulated
  Transcripts that showed significantly decreased expression in daf-16(mu86);fer-15(b26ts) comparing to in fer-15(b26ts) at 6-day or 7-day post L4 adult hermaphrodite stage. DESeq2 (v1.18.1), ajusted p-value < 0.05 WBPaper00056218:daf-16(mu86)_downregulated_Day7
  Transcripts that showed significantly decreased expression in xpf-1(tm2842) comparing to in N2 animals. DESeq2 1.14.1, fold change > 2, FDR < 0.01. WBPaper00062497:xpf-1(tm2842)_downregulated
  Proteins showing a significant increase in abundance with age. Significance was determined using Perseus version 1.4.1.3 based on the Significance B method (Benjamini-Hochberg corrected p-value; threshold 0.05). Log2-fold change values (aged/young) are sorted from the lowest to the highest. WBPaper00048579:aging_upregulated
  Proteins that co-aggregated with Q40-YFP in day 7 adults that were sarcosyl-soluble. N.A. WBPaper00046161:Q40-aggregate-protein_Day7_Sarcosyl-soluble
  Proteins showing a significant decrease in abundance with age. Significance was determined using Perseus version 1.4.1.3 based on the Significance B method (Benjamini-Hochberg corrected p-value; threshold 0.05). Log2-fold change values (aged/young) are sorted from the lowest to the highest. WBPaper00048579:aging_downregulated
  Proteins that co-aggregated with Q40-YFP in day 7 adults that were sarcosyl-insoluble. N.A. WBPaper00046161:Q40-aggregate-protein_Day7_Sarcosyl-insoluble

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr14942 qRT-PCR analysis revealed that rub-1 was increased with age at transcript levels.  

1 Followed By

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 8-9 days after L4-adult molt. 11-12 days after first cleavage. 8-days post-L4 adult hermaphrodite Ce WBls:0000672

1 Preceded By

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 6-7 days after L4-adult molt. 9-10 days after first cleavage. 6-days post-L4 adult hermaphrodite Ce WBls:0000670

0 Sub Stages