WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The quasi-likelihood F-test from the edgeR package was used to test these counts for statistically significant differential gene expression between water- and mianserin-treated samples, while controlling for expression differences between the 3 biological replicates. We performed multiple testing correction by using the Benjamini-Hochberg procedure to compute a false discovery rate (FDR) value for each gene, and we considered an FDR less than 10% to be significant. Description  Genes that increased expression in response to 50uM mianserin on adult day 5, which are not a response to aging. This is a list of 733 genes.
Primary Identifier  WBPaper00048926:miaserin_upregulated_adult-day5

0 Anatomy Terms

731 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans
WBGene00000172 aqp-4 F40F9.9 Caenorhabditis elegans
WBGene00000178 aqp-10 ZK1321.3 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000218 asp-5 F21F8.3 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000511 ckb-1 B0285.8 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000534 cpi-2 R01B10.1 Caenorhabditis elegans
WBGene00000540 cln-3.2 C01G8.2 Caenorhabditis elegans
WBGene00000546 clp-6 Y77E11A.10 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00000646 H17B01.2 H17B01.2 Caenorhabditis elegans
WBGene00000660 col-85 T21B4.2 Caenorhabditis elegans
WBGene00000661 col-86 Y81G3A.5 Caenorhabditis elegans
WBGene00000789 cpz-2 M04G12.2 Caenorhabditis elegans
WBGene00000798 crn-5 C14A4.5 Caenorhabditis elegans
WBGene00000880 cyn-4 F59E10.2 Caenorhabditis elegans
WBGene00000881 cyn-5 F31C3.1 Caenorhabditis elegans
WBGene00000963 dhp-1 R06C7.3 Caenorhabditis elegans
WBGene00000983 dhs-20 F35B12.2 Caenorhabditis elegans
WBGene00000984 dhs-21 R11D1.11 Caenorhabditis elegans
WBGene00000989 dhs-26 ZK816.5 Caenorhabditis elegans
WBGene00000990 dhs-27 C04F6.5 Caenorhabditis elegans
WBGene00000992 dhs-29 F27D9.6 Caenorhabditis elegans
WBGene00001018 dnc-2 C28H8.12 Caenorhabditis elegans
WBGene00001050 dom-3 F54C1.2 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
WBGene00001099 dsc-4 K02D7.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
mianserin WBMol:00003509