WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Estimation of transcript abundance and significantly differentially expressed genes were identified by Cuffdiff using the quartile normalization method. Transcripts with a significant change between different conditions (adjusted p-value < 0.01 by the false discovery rate, FDR) were treated as signature for each comparison. Description  Genes that showed significantly altered expression between N2 and npr-1(ur89) strains exposed to either the nematocidal B. thuringiensis B-18247, the pathogenic P. aeruginosa PA14, or the control E. coli OP50 for 12 or 24 hours.
Primary Identifier  WBPaper00049498:npr-1(ur89)_regulated_8

0 Anatomy Terms

464 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000146 ape-1 F46F3.4 Caenorhabditis elegans
WBGene00000240 pah-1 K08F8.4 Caenorhabditis elegans
WBGene00000245 bca-1 T13C5.5 Caenorhabditis elegans
WBGene00000250 bir-2 C50B8.2 Caenorhabditis elegans
WBGene00000256 bli-6 Y73B6BL.34 Caenorhabditis elegans
WBGene00000382 cdc-6 C43E11.10 Caenorhabditis elegans
WBGene00000413 cdt-1 Y54E10A.15 Caenorhabditis elegans
WBGene00000499 chk-2 Y60A3A.12 Caenorhabditis elegans
WBGene00000517 cki-2 T05A6.2 Caenorhabditis elegans
WBGene00000550 clu-1 F55H2.6 Caenorhabditis elegans
WBGene00000556 cnc-2 R09B5.3 Caenorhabditis elegans
WBGene00000592 coh-3 F08H9.1 Caenorhabditis elegans
WBGene00000647 col-71 Y49F6B.10 Caenorhabditis elegans
WBGene00000649 col-73 F11G11.12 Caenorhabditis elegans
WBGene00000671 col-96 Y41C4A.19 Caenorhabditis elegans
WBGene00000680 col-106 Y77E11A.15 Caenorhabditis elegans
WBGene00000696 col-122 T05A1.2 Caenorhabditis elegans
WBGene00000748 col-175 C35B8.1 Caenorhabditis elegans
WBGene00000754 col-181 W03G11.1 Caenorhabditis elegans
WBGene00000757 col-184 F15A2.1 Caenorhabditis elegans
WBGene00000770 cpb-1 C40H1.1 Caenorhabditis elegans
WBGene00000772 cpb-3 B0414.5 Caenorhabditis elegans
WBGene00000784 cpr-4 F44C4.3 Caenorhabditis elegans
WBGene00000817 csn-5 B0547.1 Caenorhabditis elegans
WBGene00000834 cua-1 Y76A2A.2 Caenorhabditis elegans
WBGene00000939 dcr-1 K12H4.8 Caenorhabditis elegans
WBGene00000987 dhs-24 Y60A3A.10 Caenorhabditis elegans
WBGene00000990 dhs-27 C04F6.5 Caenorhabditis elegans
WBGene00000994 ints-6 F08B4.1 Caenorhabditis elegans
WBGene00001044 dnj-26 Y39C12A.8 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans

0 Regulated By Molecule