WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression analysis was done with Rversion 2.15.3 using DESeq_1.10.1. Fold change > 2, p-value < 0.01. Description  Transcripts that showed significantly decreased expression in hira-1(gk835598) comparing to in N2 animals at L4 larva stage.
Primary Identifier  WBPaper00059739:hira-1(gk835598)_downregulated_L4
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0 Anatomy Terms

580 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000005 aat-4 T13A10.10 Caenorhabditis elegans
WBGene00000063 act-1 T04C12.6 Caenorhabditis elegans
WBGene00000118 alh-12 Y69F12A.2 Caenorhabditis elegans
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000239 bas-1 C05D2.4 Caenorhabditis elegans
WBGene00000251 bli-1 C09G5.6 Caenorhabditis elegans
WBGene00000252 bli-2 F59E12.12 Caenorhabditis elegans
WBGene00000256 bli-6 Y73B6BL.34 Caenorhabditis elegans
WBGene00000283 cah-5 R173.1 Caenorhabditis elegans
WBGene00000601 col-12 F15H10.1 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000610 col-33 F36A4.6 Caenorhabditis elegans
WBGene00000615 col-38 F54C9.4 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000626 col-49 K09H9.3 Caenorhabditis elegans
WBGene00000636 col-60 F22D6.10 Caenorhabditis elegans
WBGene00000637 col-61 C01H6.1 Caenorhabditis elegans
WBGene00000639 col-63 ZK265.2 Caenorhabditis elegans
WBGene00000647 col-71 Y49F6B.10 Caenorhabditis elegans
WBGene00000649 col-73 F11G11.12 Caenorhabditis elegans
WBGene00000653 col-77 M195.1 Caenorhabditis elegans
WBGene00000655 col-79 C09G5.3 Caenorhabditis elegans
WBGene00000664 col-89 F17C8.2 Caenorhabditis elegans
WBGene00000672 col-97 ZK1010.7 Caenorhabditis elegans
WBGene00000678 col-104 F58F6.1 Caenorhabditis elegans
WBGene00000680 col-106 Y77E11A.15 Caenorhabditis elegans
WBGene00000681 col-107 C34H4.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019627 hira-1 K10D2.1 Caenorhabditis elegans

0 Regulated By Molecule