WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in mc1DL, mc1DR, mc1V according to single cell RNAseq.
Primary Identifier  WBPaper00061340:mc1
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Pharyngeal marginal cell mc1V lineage name: ABalpappppa WBbt:0004299
Pharyngeal marginal cell mc1DL lineage name: ABalpaapapa WBbt:0004301
Pharyngeal marginal cell mc1DR lineage name: ABaraaapapa WBbt:0004300

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000156 apr-1 K04G2.8 Caenorhabditis elegans
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
WBGene00000429 ceh-2 C27A12.5 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000512 ckb-2 B0285.9 Caenorhabditis elegans
WBGene00000514 ckb-4 F22F7.5 Caenorhabditis elegans
WBGene00000800 cars-1 Y23H5A.7 Caenorhabditis elegans
WBGene00000962 dhc-1 T21E12.4 Caenorhabditis elegans
WBGene00000979 dhs-16 C10F3.2 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00001042 dnj-24 W03A5.7 Caenorhabditis elegans
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00001109 dsl-7 F15B9.9 Caenorhabditis elegans
WBGene00001186 egl-18 F55A8.1 Caenorhabditis elegans
WBGene00001244 elo-6 F41H10.8 Caenorhabditis elegans
WBGene00001303 sec-61.G F32D8.6 Caenorhabditis elegans
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
WBGene00001377 eya-1 C49A1.4 Caenorhabditis elegans
WBGene00001438 fkh-6 B0286.5 Caenorhabditis elegans
WBGene00001485 fre-1 Y113G7A.8 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001582 gfi-2 K02A11.1 Caenorhabditis elegans
WBGene00001630 gly-5 Y39E4B.12 Caenorhabditis elegans
WBGene00001666 gpa-4 T07A9.7 Caenorhabditis elegans
WBGene00001687 gpn-1 F59D12.4 Caenorhabditis elegans
WBGene00001751 gst-3 K08F4.11 Caenorhabditis elegans
WBGene00001821 ham-2 C07A12.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule