WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in pm1, pm2 according to single cell RNAseq.
Primary Identifier  WBPaper00061340:pm1_pm2
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
first layer pharyngeal muscle cell. pm1 M1 WBbt:0003744
second layer pharyngeal muscle cell. pm2 m2 WBbt:0003742

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000058 acr-19 C31H5.3 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans
WBGene00000389 cdc-25.4 R05H5.2 Caenorhabditis elegans
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
WBGene00000429 ceh-2 C27A12.5 Caenorhabditis elegans
WBGene00000445 ceh-22 F29F11.5 Caenorhabditis elegans
WBGene00000450 ceh-28 K03A11.3 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000497 chs-2 F48A11.1 Caenorhabditis elegans
WBGene00000510 cka-2 C52B9.1 Caenorhabditis elegans
WBGene00000521 cky-1 C15C8.2 Caenorhabditis elegans
WBGene00000752 col-179 C34F6.3 Caenorhabditis elegans
WBGene00000979 dhs-16 C10F3.2 Caenorhabditis elegans
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00001055 dpf-2 C27C12.7 Caenorhabditis elegans
WBGene00001109 dsl-7 F15B9.9 Caenorhabditis elegans
WBGene00001133 eat-2 Y48B6A.4 Caenorhabditis elegans
WBGene00001244 elo-6 F41H10.8 Caenorhabditis elegans
WBGene00001247 elo-9 Y53F4B.2 Caenorhabditis elegans
WBGene00001253 elt-6 F52C12.5 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans
WBGene00001377 eya-1 C49A1.4 Caenorhabditis elegans
WBGene00001484 fox-1 T07D1.4 Caenorhabditis elegans
WBGene00001541 gcy-15 ZC239.7 Caenorhabditis elegans
WBGene00001546 gcy-21 F22E5.3 Caenorhabditis elegans
WBGene00001570 gei-13 F58A4.11 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule