WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Estimation of transcript abundance and significantly differentially expressed genes were identified by Cuffdiff using the quartile normalization method. Transcripts with a significant change between different conditions (adjusted p-value < 0.01 by the false discovery rate, FDR) were treated as signature for each comparison. Description  Genes that showed significantly altered expression between N2 and npr-1(ur89) strains exposed to either the nematocidal B. thuringiensis B-18247, the pathogenic P. aeruginosa PA14, or the control E. coli OP50 for 12 or 24 hours.
Primary Identifier  WBPaper00049498:npr-1(ur89)_regulated_7

0 Anatomy Terms

283 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000369 ccf-1 Y56A3A.20 Caenorhabditis elegans
WBGene00000372 cyp-13A7 T10B9.10 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000412 cdr-1 F35E8.11 Caenorhabditis elegans
WBGene00000497 chs-2 F48A11.1 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000708 col-135 M199.5 Caenorhabditis elegans
WBGene00000718 col-145 B0222.7 Caenorhabditis elegans
WBGene00000795 crn-2 CD4.2 Caenorhabditis elegans
WBGene00000973 dhs-9 Y32H12A.3 Caenorhabditis elegans
WBGene00001157 ech-8 F01G10.2 Caenorhabditis elegans
WBGene00001391 far-7 K01A2.2 Caenorhabditis elegans
WBGene00001581 gfi-1 F57F4.3 Caenorhabditis elegans
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans
WBGene00001754 gst-6 F11G11.3 Caenorhabditis elegans
WBGene00001756 gst-8 F11G11.1 Caenorhabditis elegans
WBGene00001760 gst-12 F37B1.2 Caenorhabditis elegans
WBGene00001761 gst-13 T26C5.1 Caenorhabditis elegans
WBGene00001762 gst-14 F37B1.3 Caenorhabditis elegans
WBGene00001764 gst-16 F37B1.5 Caenorhabditis elegans
WBGene00001768 gst-20 Y48E1B.10 Caenorhabditis elegans
WBGene00001772 gst-24 F37B1.1 Caenorhabditis elegans
WBGene00001779 gst-31 Y53F4B.35 Caenorhabditis elegans
WBGene00001786 gst-38 F35E8.8 Caenorhabditis elegans
WBGene00001787 gst-39 Y53F4B.33 Caenorhabditis elegans
WBGene00001788 gst-40 F56B3.10 Caenorhabditis elegans
WBGene00001795 gtl-1 C05C12.3 Caenorhabditis elegans
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans

0 Regulated By Molecule