WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  RNA-seq count data were filtered for detected genes (> 10 counts across all samples) and analyzed using DESeq. 2 with Cook's cutoff filtering set to FALSE. Genes were counted as differentially expressed if they registered a Benjamini-Hochberg corrected p-value less than 0.05 and a log2-fold change greater than 1.2 between any pair-wise conditional comparison. Description  Genes that are down-regulated in wild-type N2 larvae compared to elt-2(ca15) larvae.
Primary Identifier  WBPaper00053606:N2_vs_elt-2(ca15)_downregulated

0 Anatomy Terms

618 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000044 acr-5 K03F8.2 Caenorhabditis elegans
WBGene00000081 ads-1 Y50D7A.7 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000215 asp-2 T18H9.2 Caenorhabditis elegans
WBGene00000218 asp-5 F21F8.3 Caenorhabditis elegans
WBGene00000302 cav-2 C56A3.7 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000431 ceh-6 K02B12.1 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000594 col-3 T28C6.6 Caenorhabditis elegans
WBGene00000691 col-117 T28C6.4 Caenorhabditis elegans
WBGene00000720 col-147 T06E4.4 Caenorhabditis elegans
WBGene00000739 col-166 T07H6.3 Caenorhabditis elegans
WBGene00000740 col-167 T10E10.2 Caenorhabditis elegans
WBGene00000741 col-168 T10E10.1 Caenorhabditis elegans
WBGene00000782 cpr-2 F36D3.9 Caenorhabditis elegans
WBGene00000785 cpr-5 W07B8.5 Caenorhabditis elegans
WBGene00000786 cpr-6 C25B8.3 Caenorhabditis elegans
WBGene00000789 cpz-2 M04G12.2 Caenorhabditis elegans
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans
WBGene00000968 dhs-4 T05F1.10 Caenorhabditis elegans
WBGene00000971 dhs-7 E04F6.7 Caenorhabditis elegans
WBGene00000977 dhs-14 R05D8.8 Caenorhabditis elegans
WBGene00000981 dhs-18 C45B11.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001250 elt-2 C33D3.1 Caenorhabditis elegans

0 Regulated By Molecule