WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in CANL, CANR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:CAN
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Process runs along excretory canal, no synapses, essential for survival CANL lineage name: ABalapaaapa WBbt:0004949
Process runs along excretory canal, no synapses, essential for survival CANR lineage name: ABalappappa WBbt:0004947

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000038 ace-4 Y48B6A.7 Caenorhabditis elegans
WBGene00000069 acy-2 C10F3.3 Caenorhabditis elegans
WBGene00000120 aly-1 C01F6.5 Caenorhabditis elegans
WBGene00000164 apm-3 F53H8.1 Caenorhabditis elegans
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans
WBGene00000280 cah-2 D1022.8 Caenorhabditis elegans
WBGene00000435 ceh-10 W03A3.1 Caenorhabditis elegans
WBGene00000446 ceh-23 ZK652.5 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000480 cgp-1 Y38C9A.2 Caenorhabditis elegans
WBGene00000496 chs-1 T25G3.2 Caenorhabditis elegans
WBGene00000515 ckc-1 T27A10.3 Caenorhabditis elegans
WBGene00000660 col-85 T21B4.2 Caenorhabditis elegans
WBGene00000664 col-89 F17C8.2 Caenorhabditis elegans
WBGene00000688 col-114 D2024.8 Caenorhabditis elegans
WBGene00000936 dbl-1 T25F10.2 Caenorhabditis elegans
WBGene00000961 dgn-1 T21B6.1 Caenorhabditis elegans
WBGene00000993 dhs-30 T25G12.7 Caenorhabditis elegans
WBGene00001156 ech-7 Y105E8A.4 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001386 far-2 F02A9.3 Caenorhabditis elegans
WBGene00001432 fkb-7 B0511.1 Caenorhabditis elegans
WBGene00001448 flp-5 C03G5.7 Caenorhabditis elegans
WBGene00001453 flp-10 T06C10.4 Caenorhabditis elegans
WBGene00001539 gcy-13 F23H12.6 Caenorhabditis elegans
WBGene00001593 glc-3 ZC317.3 Caenorhabditis elegans
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
WBGene00001648 goa-1 C26C6.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule