WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2, fold change > 2, FDR < 0.01 Description  Targets of endo-siRNA that showed significantly increased expression in BFF40[meg-3(tm4259);meg-4(ax2026);mex-5::gfp::h2b::tbb-2] comparing to in SX1263[Pmex-5::gfp::h2b::tbb-2 (mjIs134 II)] dissected gonad isolated from 1-day old adult hermaphrodites.
Primary Identifier  WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated
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0 Anatomy Terms

238 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000145 apc-11 F35G12.9 Caenorhabditis elegans
WBGene00000407 cdk-5 T27E9.3 Caenorhabditis elegans
WBGene00000443 ceh-20 F31E3.1 Caenorhabditis elegans
WBGene00000534 cpi-2 R01B10.1 Caenorhabditis elegans
WBGene00000780 cpn-4 F49D11.8 Caenorhabditis elegans
WBGene00000820 csp-2 Y73B6BL.7 Caenorhabditis elegans
WBGene00000821 csp-3 Y47H9C.6 Caenorhabditis elegans
WBGene00001169 eef-1A.2 R03G5.1 Caenorhabditis elegans
WBGene00001325 eor-2 C44H4.7 Caenorhabditis elegans
WBGene00001414 fer-1 F43G9.6 Caenorhabditis elegans
WBGene00001638 gly-13 B0416.6 Caenorhabditis elegans
WBGene00001836 hda-3 R06C1.1 Caenorhabditis elegans
WBGene00001854 hil-3 F22F1.1 Caenorhabditis elegans
WBGene00001878 his-4 T10C6.11 Caenorhabditis elegans
WBGene00001915 his-41 C50F4.5 Caenorhabditis elegans
WBGene00001921 his-47 B0035.7 Caenorhabditis elegans
WBGene00001931 his-57 F54E12.5 Caenorhabditis elegans
WBGene00001980 hmr-1 W02B9.1 Caenorhabditis elegans
WBGene00002029 hst-2 C34F6.4 Caenorhabditis elegans
WBGene00002065 iff-2 F54C9.1 Caenorhabditis elegans
WBGene00002183 kat-1 T02G5.8 Caenorhabditis elegans
WBGene00002220 gcc-1 C15C7.2 Caenorhabditis elegans
WBGene00003235 mif-2 C52E4.2 Caenorhabditis elegans
WBGene00003550 nas-32 T02B11.7 Caenorhabditis elegans
WBGene00003915 pan-1 M88.6 Caenorhabditis elegans
WBGene00003941 pbo-1 Y71H2AL.1 Caenorhabditis elegans
WBGene00003970 pek-1 F46C3.1 Caenorhabditis elegans
WBGene00004044 plk-3 F55G1.8 Caenorhabditis elegans
WBGene00004164 pqn-83 Y39E4B.3 Caenorhabditis elegans
WBGene00004238 ptr-24 F46G10.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

2 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001569 meg-3 F52D2.4 Caenorhabditis elegans
WBGene00016485 meg-4 C36C9.1 Caenorhabditis elegans

0 Regulated By Molecule