WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2 Description  Transcripts that showed significantly increased expression after N2 L4 animals were infected by P. aeruginosa (PA14) bacteria for 4 hours at 25C, but pmk-1(km25) animals showed reduced fold change after they went through the same infection.
Primary Identifier  WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent Regulated By Treatment  Bacteria infection: Pseudomonas aeruginosa PA14. 4 hours at 25C.

0 Anatomy Terms

409 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000160 apb-1 Y71H2B.10 Caenorhabditis elegans
WBGene00000181 ard-1 F01G4.2 Caenorhabditis elegans
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000375 cyp-44A1 ZK177.5 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
WBGene00000514 ckb-4 F22F7.5 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000793 crh-1 Y41C4A.4 Caenorhabditis elegans
WBGene00000820 csp-2 Y73B6BL.7 Caenorhabditis elegans
WBGene00000882 cyn-6 F42G9.2 Caenorhabditis elegans
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
WBGene00000942 deb-1 ZC477.9 Caenorhabditis elegans
WBGene00001017 dnc-1 ZK593.5 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001175 egl-6 C46F4.1 Caenorhabditis elegans
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
WBGene00001414 fer-1 F43G9.6 Caenorhabditis elegans
WBGene00001439 fkh-7 F26D12.1 Caenorhabditis elegans
WBGene00001477 fmo-2 K08C7.5 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001643 gly-18 F22D6.11 Caenorhabditis elegans
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans
WBGene00001762 gst-14 F37B1.3 Caenorhabditis elegans
WBGene00001769 gst-21 ZK697.6 Caenorhabditis elegans
WBGene00001773 gst-25 F37F2.3 Caenorhabditis elegans
WBGene00001852 hil-1 C30G7.1 Caenorhabditis elegans
WBGene00001955 hlh-11 F58A4.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004055 pmk-1 B0218.3 Caenorhabditis elegans

0 Regulated By Molecule