WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Data were RMA normalized and probe-level data were Summarized with the NimbleScan software. Genes with weak signal intensity across all groups and those with low variability across samples were excluded from further analysis. Each H2S-treated sample was statistically compared to a matched untreated control using the Bioconductor package limma. The false discovery rate (FDR) method of Benjamini and Hochberg was used to adjust p-values for multiple testing. An adjusted p-value <= 0.05 was used to define differential expression. Description  Genes that are significantly up regulated after 24 hour exposure to H2S.
Primary Identifier  WBPaper00040285:H2S_24hr_upregulated

0 Anatomy Terms

502 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000157 aps-2 F02E8.3 Caenorhabditis elegans
WBGene00000159 aps-1 F29G9.3 Caenorhabditis elegans
WBGene00000184 arf-6 Y116A8C.12 Caenorhabditis elegans
WBGene00000235 baf-1 B0464.7 Caenorhabditis elegans
WBGene00000249 bir-1 T27F2.3 Caenorhabditis elegans
WBGene00000262 bra-1 F54B11.6 Caenorhabditis elegans
WBGene00000388 cdc-25.3 ZK637.11 Caenorhabditis elegans
WBGene00000408 cdk-7 Y39G10AL.3 Caenorhabditis elegans
WBGene00000422 ced-8 F08F1.5 Caenorhabditis elegans
WBGene00000457 ceh-36 C37E2.4 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000525 clc-4 T05A10.2 Caenorhabditis elegans
WBGene00000556 cnc-2 R09B5.3 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000670 col-95 Y41C4A.16 Caenorhabditis elegans
WBGene00000764 coq-4 T03F1.2 Caenorhabditis elegans
WBGene00001040 dnj-22 T23B12.7 Caenorhabditis elegans
WBGene00001103 dsl-1 W09G12.4 Caenorhabditis elegans
WBGene00001104 dsl-2 W09G12.1 Caenorhabditis elegans
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans
WBGene00001175 egl-6 C46F4.1 Caenorhabditis elegans
WBGene00001253 elt-6 F52C12.5 Caenorhabditis elegans
WBGene00001309 emr-1 M01D7.6 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001434 fkh-2 T14G12.4 Caenorhabditis elegans
WBGene00001435 fkh-3 C29F7.4 Caenorhabditis elegans
WBGene00001646 gna-1 B0024.12 Caenorhabditis elegans
WBGene00001647 gna-2 T23G11.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
hydrogen sulfide WBMol:00004296