WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ABaraapapaa, ABaraapppaa according to single cell RNAseq.
Primary Identifier  WBPaper00061340:NSM_parent
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell ABaraapapaa   WBbt:0006455
embryonic cell ABaraapppaa   WBbt:0006566

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000265 brd-1 K04C2.4 Caenorhabditis elegans
WBGene00000295 cat-1 W01C8.6 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000674 col-99 F29C4.8 Caenorhabditis elegans
WBGene00000777 cpn-1 F43G9.9 Caenorhabditis elegans
WBGene00000891 cyn-15 Y87G2A.6 Caenorhabditis elegans
WBGene00001207 egl-43 R53.3 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001372 exo-3 R09B3.1 Caenorhabditis elegans
WBGene00001377 eya-1 C49A1.4 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001539 gcy-13 F23H12.6 Caenorhabditis elegans
WBGene00001589 gip-1 H04J21.3 Caenorhabditis elegans
WBGene00001606 gln-5 F26D10.10 Caenorhabditis elegans
WBGene00001607 gln-6 C28D4.3 Caenorhabditis elegans
WBGene00001619 glr-8 F22A3.3 Caenorhabditis elegans
WBGene00001759 gst-11 R11G1.3 Caenorhabditis elegans
WBGene00001820 ham-1 F53B2.6 Caenorhabditis elegans
WBGene00001853 hil-2 Y73B6BL.9 Caenorhabditis elegans
WBGene00001854 hil-3 F22F1.1 Caenorhabditis elegans
WBGene00001858 hil-7 C01B10.5 Caenorhabditis elegans
WBGene00001914 his-40 K03A1.1 Caenorhabditis elegans
WBGene00001958 hlh-14 C18A3.8 Caenorhabditis elegans
WBGene00001972 hmg-1.2 F47D12.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule