WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Pair-wise significance testing (mutant/RNAi vs. wild-type/vector) was performed using the Bioconductor package limma and p-values were initially corrected for multiple testing using the false discovery rate (FDR) method of Benjamini and Hochberg. Authors defined differential expression as log2(ratio) >= 0.848 with the FDR set to 5%, and p-value <= 0.001. Description  Genes up-regulated in acs-3(ft5) mutants.
Primary Identifier  WBPaper00045015:acs-3(ft5)_upregulated

0 Anatomy Terms

267 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000058 acr-19 C31H5.3 Caenorhabditis elegans
WBGene00000173 aqp-5 C35A5.1 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000485 che-3 F18C12.1 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000556 cnc-2 R09B5.3 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000760 col-187 C30F2.1 Caenorhabditis elegans
WBGene00000981 dhs-18 C45B11.3 Caenorhabditis elegans
WBGene00000991 dhs-28 M03A8.1 Caenorhabditis elegans
WBGene00001119 dyf-3 C04C3.5 Caenorhabditis elegans
WBGene00001152 ech-3 F43H9.1 Caenorhabditis elegans
WBGene00001157 ech-8 F01G10.2 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001429 fkb-4 ZC455.10 Caenorhabditis elegans
WBGene00001476 fmo-1 K08C7.2 Caenorhabditis elegans
WBGene00001478 fmo-3 Y39A1A.19 Caenorhabditis elegans
WBGene00001541 gcy-15 ZC239.7 Caenorhabditis elegans
WBGene00001557 gcy-37 C54E4.3 Caenorhabditis elegans
WBGene00001615 glr-4 C06A8.9 Caenorhabditis elegans
WBGene00001691 grd-2 F46B3.5 Caenorhabditis elegans
WBGene00001859 hil-8 T05E8.2 Caenorhabditis elegans
WBGene00002270 lec-7 R07B1.2 Caenorhabditis elegans
WBGene00002393 lpr-1 Y65B4BR.2 Caenorhabditis elegans
WBGene00003544 nas-25 F46C5.3 Caenorhabditis elegans
WBGene00003547 nas-29 F58A6.4 Caenorhabditis elegans
WBGene00003558 nca-2 C27F2.2 Caenorhabditis elegans
WBGene00003653 nhr-63 C06C6.4 Caenorhabditis elegans
WBGene00003669 nhr-79 T26H2.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020343 acs-3 T08B1.6 Caenorhabditis elegans

0 Regulated By Molecule