WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify transcripts enriched in RIP samples, background corrected and normalized data were analyzed with the Bioconductor package Siggenes (siggenes 1.38.0) using two-class significance analysis of microarrays (SAM function). Description  FOG-1associated mRNAs identified by RIP-ChIP
Primary Identifier  WBPaper00048762:FOG-3_associated
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0 Anatomy Terms

721 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000001 aap-1 Y110A7A.10 Caenorhabditis elegans
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000101 aka-1 D1022.7 Caenorhabditis elegans
WBGene00000145 apc-11 F35G12.9 Caenorhabditis elegans
WBGene00000151 apn-1 T05H10.2 Caenorhabditis elegans
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans
WBGene00000192 arl-8 Y57G11C.13 Caenorhabditis elegans
WBGene00000249 bir-1 T27F2.3 Caenorhabditis elegans
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000386 cdc-25.1 K06A5.7 Caenorhabditis elegans
WBGene00000407 cdk-5 T27E9.3 Caenorhabditis elegans
WBGene00000415 ced-1 Y47H9C.4 Caenorhabditis elegans
WBGene00000418 ced-4 C35D10.9 Caenorhabditis elegans
WBGene00000420 ced-6 F56D2.7 Caenorhabditis elegans
WBGene00000426 ced-12 Y106G6E.5 Caenorhabditis elegans
WBGene00000459 ceh-38 F22D3.1 Caenorhabditis elegans
WBGene00000460 ceh-39 T26C11.7 Caenorhabditis elegans
WBGene00000465 cpg-1 C07G2.1 Caenorhabditis elegans
WBGene00000467 cep-1 F52B5.5 Caenorhabditis elegans
WBGene00000496 chs-1 T25G3.2 Caenorhabditis elegans
WBGene00000517 cki-2 T05A6.2 Caenorhabditis elegans
WBGene00000520 cku-80 R07E5.8 Caenorhabditis elegans
WBGene00000532 clh-5 C07H4.2 Caenorhabditis elegans
WBGene00000543 clp-2 T04A8.16 Caenorhabditis elegans
WBGene00000770 cpb-1 C40H1.1 Caenorhabditis elegans
WBGene00000771 cpb-2 C30B5.3 Caenorhabditis elegans
WBGene00000772 cpb-3 B0414.5 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001483 fog-3 C03C11.2 Caenorhabditis elegans

0 Regulated By Molecule