WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Ballgown was used to calculate differential expression of genes using FPKM data and to generate tables with fold change and P values. Genes were shortlisted with a cutoff of 2-fold change and P values of less than 0.05. Description  Transcripts that showed significantly increased expression after infection by P. aeruginosa PA14.
Primary Identifier  WBPaper00059754:P.aeruginosa_PA14_upregulated Regulated By Treatment  Bacteria: P.aeruginosa strain PA14

0 Anatomy Terms

513 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
WBGene00000268 bre-3 B0464.4 Caenorhabditis elegans
WBGene00000302 cav-2 C56A3.7 Caenorhabditis elegans
WBGene00000379 cct-4 K01C8.10 Caenorhabditis elegans
WBGene00000412 cdr-1 F35E8.11 Caenorhabditis elegans
WBGene00000416 ced-2 Y41D4B.13 Caenorhabditis elegans
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000981 dhs-18 C45B11.3 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001325 eor-2 C44H4.7 Caenorhabditis elegans
WBGene00001371 exl-1 F26H11.5 Caenorhabditis elegans
WBGene00001391 far-7 K01A2.2 Caenorhabditis elegans
WBGene00001439 fkh-7 F26D12.1 Caenorhabditis elegans
WBGene00001451 flp-8 F31F6.4 Caenorhabditis elegans
WBGene00001506 fut-2 EGAP9.2 Caenorhabditis elegans
WBGene00001558 gdi-1 Y57G11C.10 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00001671 gpa-9 F56H9.4 Caenorhabditis elegans
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans
WBGene00001754 gst-6 F11G11.3 Caenorhabditis elegans
WBGene00001756 gst-8 F11G11.1 Caenorhabditis elegans
WBGene00001760 gst-12 F37B1.2 Caenorhabditis elegans
WBGene00001762 gst-14 F37B1.3 Caenorhabditis elegans
WBGene00001769 gst-21 ZK697.6 Caenorhabditis elegans
WBGene00001770 gst-22 F21H7.1 Caenorhabditis elegans
WBGene00001773 gst-25 F37F2.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

0 Regulated By Gene

0 Regulated By Molecule