WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing. Description  Maternal degradation-embryonic class (MDE): genes that are the subset of maternal degradation genes that significantly increase in at least two of the eight total paired timepoint tests in the induction-following-degradation time domain.
Primary Identifier  [cgc5767]:expression_class_MDE

0 Anatomy Terms

654 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans
WBGene00000110 alh-4 T05H4.13 Caenorhabditis elegans
WBGene00000137 amx-1 R13G10.2 Caenorhabditis elegans
WBGene00000147 aph-1 VF36H2L.1 Caenorhabditis elegans
WBGene00000157 aps-2 F02E8.3 Caenorhabditis elegans
WBGene00000159 aps-1 F29G9.3 Caenorhabditis elegans
WBGene00000180 arc-1 ZK1320.6 Caenorhabditis elegans
WBGene00000192 arl-8 Y57G11C.13 Caenorhabditis elegans
WBGene00000198 art-1 C15F1.6 Caenorhabditis elegans
WBGene00000200 arx-2 K07C5.1 Caenorhabditis elegans
WBGene00000201 arx-3 Y79H2A.6 Caenorhabditis elegans
WBGene00000203 arx-5 Y37D8A.1 Caenorhabditis elegans
WBGene00000204 arx-6 C35D10.16 Caenorhabditis elegans
WBGene00000205 arx-7 M01B12.3 Caenorhabditis elegans
WBGene00000223 atf-7 C07G2.2 Caenorhabditis elegans
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans
WBGene00000292 cap-1 D2024.6 Caenorhabditis elegans
WBGene00000381 cct-6 F01F1.8 Caenorhabditis elegans
WBGene00000407 cdk-5 T27E9.3 Caenorhabditis elegans
WBGene00000418 ced-4 C35D10.9 Caenorhabditis elegans
WBGene00000498 chk-1 Y39H10A.7 Caenorhabditis elegans
WBGene00000500 chn-1 T09B4.10 Caenorhabditis elegans
WBGene00000516 cki-1 T05A6.1 Caenorhabditis elegans
WBGene00000519 cku-70 Y47D3A.4 Caenorhabditis elegans
WBGene00000532 clh-5 C07H4.2 Caenorhabditis elegans
WBGene00000543 clp-2 T04A8.16 Caenorhabditis elegans
WBGene00000585 cogc-2 C06G3.10 Caenorhabditis elegans
WBGene00000762 coq-2 F57B9.4 Caenorhabditis elegans
WBGene00000773 cpf-1 F28C6.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003

0 Processes

0 Regulated By Gene

0 Regulated By Molecule