WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ABplppaapa, ABprppaapa according to single cell RNAseq.
Primary Identifier  WBPaper00061340:RIM_parent
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell ABprppaapa   WBbt:0006079
embryonic cell ABplppaapa   WBbt:0006205

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000262 bra-1 F54B11.6 Caenorhabditis elegans
WBGene00000289 cam-1 C01G6.8 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans
WBGene00000418 ced-4 C35D10.9 Caenorhabditis elegans
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans
WBGene00000464 ceh-44 Y54F10AM.4 Caenorhabditis elegans
WBGene00000468 ces-1 F43G9.11 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000692 col-118 T11B7.3 Caenorhabditis elegans
WBGene00000773 cpf-1 F28C6.3 Caenorhabditis elegans
WBGene00000777 cpn-1 F43G9.9 Caenorhabditis elegans
WBGene00000813 csn-1 Y59A8A.1 Caenorhabditis elegans
WBGene00000865 cyb-1 ZC168.4 Caenorhabditis elegans
WBGene00000867 cyb-2.2 H31G24.4 Caenorhabditis elegans
WBGene00000889 cyn-13 Y116A8C.34 Caenorhabditis elegans
WBGene00000961 dgn-1 T21B6.1 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001170 egl-1 F23B12.9 Caenorhabditis elegans
WBGene00001208 egl-44 F28B12.2 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001324 eor-1 R11E3.6 Caenorhabditis elegans
WBGene00001396 fat-4 T13F2.1 Caenorhabditis elegans
WBGene00001499 fsn-1 C26E6.5 Caenorhabditis elegans
WBGene00001577 gem-4 T12A7.1 Caenorhabditis elegans
WBGene00001653 gon-4 K04D7.5 Caenorhabditis elegans
WBGene00001670 gpa-8 F56H9.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule