WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ABalapappaa, ABalappppaa, ABalapaappa, ABalaappppa, ABalppapppa, ABarapppppa according to single cell RNAseq.
Primary Identifier  WBPaper00061340:IL1_parent
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell ABalapaappa   WBbt:0006196
embryonic cell ABarapppppa   WBbt:0006203
embryonic cell ABalppapppa   WBbt:0006463
embryonic cell ABalappppaa   WBbt:0006522
embryonic cell ABalapappaa   WBbt:0006542
embryonic cell ABalaappppa   WBbt:0006560

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000186 ark-1 C01C7.1 Caenorhabditis elegans
WBGene00000193 arl-6 C38D4.8 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000241 bbs-1 Y105E8A.5 Caenorhabditis elegans
WBGene00000242 bbs-2 F20D12.3 Caenorhabditis elegans
WBGene00000244 bbs-8 T25F10.5 Caenorhabditis elegans
WBGene00000265 brd-1 K04C2.4 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000405 cdk-1 T05G5.3 Caenorhabditis elegans
WBGene00000425 ced-11 ZK512.3 Caenorhabditis elegans
WBGene00000433 ceh-8 ZK265.4 Caenorhabditis elegans
WBGene00000437 ceh-13 R13A5.5 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000476 cfi-1 T23D8.8 Caenorhabditis elegans
WBGene00000484 che-2 F38G1.1 Caenorhabditis elegans
WBGene00000492 che-13 F59C6.7 Caenorhabditis elegans
WBGene00000527 cle-1 C36B1.1 Caenorhabditis elegans
WBGene00000566 cnt-2 Y39A1A.15 Caenorhabditis elegans
WBGene00000627 col-50 T28F2.6 Caenorhabditis elegans
WBGene00000648 col-72 W09G10.1 Caenorhabditis elegans
WBGene00000723 col-150 B0024.2 Caenorhabditis elegans
WBGene00000792 crb-1 F11C7.4 Caenorhabditis elegans
WBGene00000906 daf-10 F23B2.4 Caenorhabditis elegans
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans
WBGene00000950 deg-1 C47C12.6 Caenorhabditis elegans
WBGene00001117 dyf-1 F54C1.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule