WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Pair-wise significance testing (mutant/RNAi vs. wild-type/vector) was performed using the Bioconductor package limma and p-values were initially corrected for multiple testing using the false discovery rate (FDR) method of Benjamini and Hochberg. Authors defined differential expression as log2(ratio) >= 0.848 with the FDR set to 5%, and p-value <= 0.001. Description  Genes down-regulated in acs-3(ft5) mutants.
Primary Identifier  WBPaper00045015:acs-3(ft5)_downregulated

0 Anatomy Terms

138 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000608 col-19 ZK1193.1 Caenorhabditis elegans
WBGene00000609 col-20 F11G11.11 Caenorhabditis elegans
WBGene00000622 col-45 F53G12.7 Caenorhabditis elegans
WBGene00000675 col-101 K02D7.3 Caenorhabditis elegans
WBGene00000693 col-119 C53B4.5 Caenorhabditis elegans
WBGene00000696 col-122 T05A1.2 Caenorhabditis elegans
WBGene00000713 col-140 F26F12.1 Caenorhabditis elegans
WBGene00000751 col-178 C34F6.2 Caenorhabditis elegans
WBGene00000752 col-179 C34F6.3 Caenorhabditis elegans
WBGene00001618 glr-7 C43H6.9 Caenorhabditis elegans
WBGene00001622 glt-4 T22E5.2 Caenorhabditis elegans
WBGene00001642 gly-17 T15D6.3 Caenorhabditis elegans
WBGene00002130 inx-8 ZK792.2 Caenorhabditis elegans
WBGene00003377 mls-2 C39E6.4 Caenorhabditis elegans
WBGene00004203 swsn-1 Y113G7B.23 Caenorhabditis elegans
WBGene00004255 epac-1 T20G5.5 Caenorhabditis elegans
WBGene00004819 skr-13 C52D10.8 Caenorhabditis elegans
WBGene00005088 srd-10 Y45F10B.14 Caenorhabditis elegans
WBGene00005108 srd-30 F07C4.5 Caenorhabditis elegans
WBGene00005231 srh-5 K04F1.16 Caenorhabditis elegans
WBGene00005464 srh-258 T06E6.7 Caenorhabditis elegans
WBGene00005859 srw-112 K12D9.9 Caenorhabditis elegans
WBGene00005880 srw-133 T05B4.6 Caenorhabditis elegans
WBGene00006233 str-196 T01G6.3 Caenorhabditis elegans
WBGene00006259 str-228 C07G3.5 Caenorhabditis elegans
WBGene00006273 str-246 W09D6.3 Caenorhabditis elegans
WBGene00006419 oac-39 R02C2.3 Caenorhabditis elegans
WBGene00006830 unc-103 C30D11.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020343 acs-3 T08B1.6 Caenorhabditis elegans

0 Regulated By Molecule