WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in g1AL, g1AR, g1P according to single cell RNAseq.
Primary Identifier  WBPaper00061340:g1A_g1P
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3 Anatomy Terms

Definition Name Synonym Primary Identifier
Pharyngeal gland cell 1P, before fusion into g1ARP. g1P lineage name: MSaaaaapap WBbt:0004528
Pharyngeal gland cell 1AL. g1AL lineage name: MSaapaapaa WBbt:0004532
Pharyngeal gland cell 1AR, before fusion into g1ARP. g1AR lineage name: MSpapaapaa WBbt:0004530

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
WBGene00000448 pros-1 K12H4.1 Caenorhabditis elegans
WBGene00000450 ceh-28 K03A11.3 Caenorhabditis elegans
WBGene00000534 cpi-2 R01B10.1 Caenorhabditis elegans
WBGene00000802 crt-1 Y38A10A.5 Caenorhabditis elegans
WBGene00000901 daf-5 W01G7.1 Caenorhabditis elegans
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00001170 egl-1 F23B12.9 Caenorhabditis elegans
WBGene00001368 exc-7 F35H8.5 Caenorhabditis elegans
WBGene00001439 fkh-7 F26D12.1 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001627 gly-2 C55B7.2 Caenorhabditis elegans
WBGene00001628 gly-3 ZK688.8 Caenorhabditis elegans
WBGene00001630 gly-5 Y39E4B.12 Caenorhabditis elegans
WBGene00001632 gly-7 Y46H3A.6 Caenorhabditis elegans
WBGene00001635 gly-10 Y45F10D.3 Caenorhabditis elegans
WBGene00001636 gly-11 Y75B8A.9 Caenorhabditis elegans
WBGene00001787 gst-39 Y53F4B.33 Caenorhabditis elegans
WBGene00001820 ham-1 F53B2.6 Caenorhabditis elegans
WBGene00001858 hil-7 C01B10.5 Caenorhabditis elegans
WBGene00001952 hlh-6 T15H9.3 Caenorhabditis elegans
WBGene00002007 hsp-3 C15H9.6 Caenorhabditis elegans
WBGene00002016 hsp-16.2 Y46H3A.3 Caenorhabditis elegans
WBGene00002018 hsp-16.41 Y46H3A.2 Caenorhabditis elegans
WBGene00002036 hum-2 F36D4.3 Caenorhabditis elegans
WBGene00002043 hyl-1 C09G4.1 Caenorhabditis elegans
WBGene00002070 ile-1 K07A1.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule